Volume 23 Issue 8
Aug.  2025
Turn off MathJax
Article Contents
GONG Zhiming, HUANG Feiwu, ZHAO Yunan, CHEN Jiaoli, ZHAO Xinmi, XU Jianfen, HUANG Jiansheng. The molecular epidemiology of carbapenem-resistant Citrobacter freundii in Lishui City[J]. Chinese Journal of General Practice, 2025, 23(8): 1377-1381. doi: 10.16766/j.cnki.issn.1674-4152.004138
Citation: GONG Zhiming, HUANG Feiwu, ZHAO Yunan, CHEN Jiaoli, ZHAO Xinmi, XU Jianfen, HUANG Jiansheng. The molecular epidemiology of carbapenem-resistant Citrobacter freundii in Lishui City[J]. Chinese Journal of General Practice, 2025, 23(8): 1377-1381. doi: 10.16766/j.cnki.issn.1674-4152.004138

The molecular epidemiology of carbapenem-resistant Citrobacter freundii in Lishui City

doi: 10.16766/j.cnki.issn.1674-4152.004138
Funds:

 LHDMZ23H190001

 LHDMY24H190001

 2024XY103

 2023ZDYF16

 2023GYX43

 2024SJZC102

  • Received Date: 2024-12-03
    Available Online: 2025-10-31
  •   Objective  To analyze the resistance mechanisms and molecular epidemiological characteristics of carbapenem-resistant Citrobacter freundii (CRCF), providing laboratory evidence for clinical prevention and treatment.  Methods  CRCF strains collected from January 2016 to December 2022 in Lishui Central Hospital were tested for MIC using the broth microdilution method. PCR was employed to detect carbapenemase genes (blaKPC-2, blaNDM-1, blaIMP-1, blaVIM-1, blaOXA-48), and the genetic background of resistance genes. Conjugation and transformation experiments were conducted to analyze plasmid transferability and plasmid typing. MLST typing was combined with CRCF strains from the PubMed database for phylogenetic analysis.  Results  The resistance rates of 17 CRCF isolates were 100% (17/17) to trimethoprim/sulfamethoxazole; 76.5% (13/17) to ceftazidime, cefepime, and aztreonam; 82.4% (14/17) to meropenem; 64.7% (11/17) to imipenem; 94.1% (16/17) to piperacillin/tazobactam; 58.8% (10/17) to LVX; 47.1% (8/17) to amikacin; 11.8% (2/17) to polymyxin; and the lowest resistance rate was to tigecycline at 5.9% (1/17). Among these strains, 11 carried blaNDM-1, 5 carried blaKPC-2, and 1 carried blaIMP-4. 54.5%(6/11)of blaNDM-1 were located on IncX3 plasmids, while all of blaKPC-2 were located on IncFⅡ plasmids. The strains were classified into 14 ST types, with phylogenetic analysis indicating sporadic distribution.  Conclusion  CRCF in Lishui exhibits high resistance to carbapenem antibiotics, primarily carrying blaNDM-1 and blaKPC-2, presenting a sporadic epidemic pattern.

     

  • loading
  • [1]
    朱玉, 张龙, 魏取好. 弗劳地枸橼酸杆菌的临床分布及其耐药性分析[J]. 齐齐哈尔医学院学报, 2022, 43(12): 1109-1113.

    ZHU Y, ZHANG L, WEI Q H. Clinical distribution and drug resistance analysis of Citrobacter freundii[J]. Journal of Qiqihar Medical University, 2022, 43(12): 1109-1113.
    [2]
    杜娜, 李焕芹, 刘淑敏, 等. 碳青霉烯类耐药弗劳地枸橼酸杆菌耐药及毒力基因的分析[J]. 微生物学免疫学进展, 2021, 49(1): 17-22.

    DU N, LI. H Q, LIU S M, et al. Analysis of drug resistance and virulence genes of carbapenem-resistant Citrobacter freundii[J]. Advances in Microbiology and Immunology, 2021, 49(1): 17-22.
    [3]
    黄蓉, 段小女, 芮勇宇. 多重耐药弗劳地枸橼酸杆菌的基因组及耐药机制分析[J]. 国际检验医学杂志, 2024, 45(7): 785-789.

    HUANG R, DUAN X N, RUI Y Y. Genomic and drug resistance mechanism analysis of multidrug-resistant Citrobacter freundii[J]. International Journal of Laboratory Medicine, 2024, 45(7): 785-789.
    [4]
    任建伟, 朱光发. 碳青霉烯类耐药肠杆菌目细菌的耐药机制与快速检测[J]. 心肺血管病杂志, 2023, 42(10): 1087-1091.

    REN J W, ZHU G F. Drug resistance mechanism and rapid detection of carbapenem-resistant Enterobacteriaceae[J]. Journal of Cardiovascular and Pulmonary Diseases, 2023, 42(10): 1087-1091.
    [5]
    武亚鑫, 赵敏, 李浩然. 耐碳青霉烯肺炎克雷伯菌流行现状、耐药机制及抗菌药物诊疗进展[J]. 长春中医药大学学报, 2023, 39(1): 96-103.

    WU Y X, ZHAO M, LI H R. Current status of carbapenem-resistant Klebsiella pneumoniae, drug resistance mechanism and progress in antimicrobial treatment[J]. Journal of Changchun University of Traditional Chinese Medicine, 2023, 39(1): 96-103.
    [6]
    李凤妍, 严茹钰, 曹小利. 肺炎克雷伯菌碳青霉烯酶研究进展[J]. 临床检验杂志, 2023, 41(9): 684-687.

    LI F Y, YAN R Y, CAO X L. Research progress of carbapenemase in Klebsiella pneumoniae[J]. Journal of Clinical Laboratory, 2023, 41(9): 684-687.
    [7]
    Clinical and Laboratory Standards Institute. Performance standards for antimicrobial susceptibility testing: CLSI M100[S]. Wayne, PA: Clinical and Laboratory Standards Institute, 2021.
    [8]
    胡玉明, 李娟. mCIM联合eCIM检测产碳青霉烯酶肠杆菌科细菌的临床应用[J]. 中华预防医学杂志, 2021, 55(4): 506-511.

    HU Y M, LI J. Clinical application of mCIM and eCIM combined detection of carbapenemase-producing enterobacteriaceae[J]. Chinese Journal of Preventive Medicine, 2021, 55(4): 506-511.
    [9]
    COSKUN U S S, CALISKAN E, CICEK A C, et al. β-lactamase genes in carbapenem resistance Acinetobacter baumannii isolates from a Turkish university hospital[J]. J Infect Dev Ctries, 2019, 13(1): 50-55. doi: 10.3855/jidc.10556
    [10]
    ZHAO D, GAO F, GUAN P, et al. Identification and analysis of differentially expressed trihelix genes in maize (Zea mays) under abiotic stresses[J]. Peer J, 2023, 11: e15321. DOI: 10.7717/peerj.15321.
    [11]
    XIAO S, TANG C, ZENG Q, et al. Antimicrobial resistance and molecular epidemiology of Escherichia coli from bloodstream infection in Shanghai, China, 2016-2019[J]. Front Med (Lausanne), 2021, 8: 803837. DOI: 10.3389/fmed.2021.803837.
    [12]
    LI P, LUO W Y, XIANG T X, et al. Isolation of Hv-CRKP with co-production of three carbapenemases (blaKPC, blaOXA-181 or OXA-232, and blaNDM-1) and a virulence plasmid: a study from a Chinese tertiary hospital[J]. Front Microbiol, 2023, 14: 1182870. DOI: 10.3389/fmicb.2023.1182870.
    [13]
    兰敏, 赵志军, 康宇婷, 等. 耐碳青霉烯类肠杆菌目细菌分子流行病学特征及耐药性[J]. 中国感染控制杂志, 2022, 21(11): 1053-1059.

    LAN M, ZHAO Z J, KANG Y T, et al. Molecular epidemiological characteristics and drug resistance of carbapenem-resistant Enterobacteriaceae[J]. Chinese Journal of Infection Control, 2022, 21(11): 1053-1059.
    [14]
    马雪娇, 程君, 胡立芬, 等. 临床分离弗劳地枸橼酸杆菌耐药性分析及质粒介导的AmpC酶基因检测[J]. 安徽医学, 2019, 40(9): 966-970.

    MA X J, CHENG J, HU L F, et al. Drug resistance analysis of clinical isolated Citrobacter freundii and detection of plasmid-mediated AmpC enzyme gene[J]. Anhui Medical Journal, 2019, 40(9): 966-970.
    [15]
    DZIRI R, KUSKUCU M A, ARFAOUI A, et al. Whole genome sequencing of a Citrobacter freundii strain isolated from the hospital environment: an extremely multiresistant NDM-1 and VIM-48 coproducing isolate[J]. Microb Drug Resist, 2022, 28(1): 18-22. doi: 10.1089/mdr.2020.0417
    [16]
    QIAO J, CHEN Y, GE H, et al. Coexistence of blaIMP-4, blaNDM-1 and blaOXA-1 in blaKPC-2-producing Citrobacter freundii of clinical origin in China[J]. Front Microbiol, 2023, 14: 1074612. DOI: 10.3389/fmicb.2023.1074612.
    [17]
    陈建飞, 方寅飞, 徐浩. 耐碳青霉烯类弗劳地枸橼酸杆菌致医院获得性感染的临床特征与耐药性分析[J]. 中国消毒学杂志, 2022, 39(4): 282-285.

    CHEN J F, FANG Y F, XU H. Clinical characteristics and drug resistance analysis of carbapenem-resistant Citrobacter freundii causing hospital-acquired infections[J]. Chinese Journal of Disinfection, 2022, 39(4): 282-285.
    [18]
    弗林迪, 方颍, 张嵘, 等. 弗劳地枸橼酸杆菌中质粒介导的KPC-2和NDM-1型碳青霉烯酶基因结构分析[J]. 临床检验杂志, 2016, 34(6): 423-427.

    FU L D, FANG Y, ZHANG R, et al. Analysis of plasmid-mediated KPC-2 and NDM-1 carbapenemase gene structures in Citrobacter freundii[J]. Journal of Clinical Laboratory, 2016, 34(6): 423-427.
    [19]
    郭燕, 胡付品, 朱德妹, 等. 2023年CHINET中国细菌耐药监测[J]. 中国感染与化疗杂志, 2024, 24(6): 627-637.

    GUO Y, HU F P, ZHU D M, et al. Antimicrobial resistance profile of clinical isolates in hospitals across China: report from the CHINET Antimicrobial Resistance Surveillance Program, 2023[J]. Chinese Journal of Infection and Chemotherapy, 2024, 24(6): 627-637.
    [20]
    WANG Q, DONG K, LIU X, et al. Genetic characteristics of chromosomally integrated carbapenemase gene blaNDM-1 in isolates of Proteus mirabilis[J]. BMC Microbiol, 2024, 24(1): 216. DOI: 10.1186/s12866-024-03274-9.
    [21]
    TOUATI A, MANSEUR L, MEHIDI I, et al. Epidemiological and genetic features of plasmids carrying blaNDM genes: an in silico analysis with emphasis on replicon types, and resistome[J]. Microb Drug Resist, 2021, 27(9): 1232-1242. doi: 10.1089/mdr.2020.0427
    [22]
    史杨, 彭莉蓉, 黄建胜, 等. 产新德里金属β-内酰胺酶大肠埃希菌的耐药机制及分子流行病学研究[J]. 中华全科医学, 2019, 17(10): 1640-1643. doi: 10.16766/j.cnki.issn.1674-4152.001017

    SHI Y, PENG L R, HUANG J S, et al. Resistance mechanism and molecular epidemiology of Escherichia coli producing new delhi metal β-lactamase[J]. Chinese Journal of General Practice, 2019, 17(10): 1640-1643. doi: 10.16766/j.cnki.issn.1674-4152.001017
    [23]
    CEJAS D, MAGARIÑOS F, ELENA A, et al. Emergence and clonal expansion of Klebsiella pneumoniae ST307, simultaneously producing KPC-3 and NDM-1[J]. Rev Argent Microbiol, 2022, 54(4): 288-922.
  • 加载中

Catalog

    通讯作者: 陈斌, bchen63@163.com
    • 1. 

      沈阳化工大学材料科学与工程学院 沈阳 110142

    1. 本站搜索
    2. 百度学术搜索
    3. 万方数据库搜索
    4. CNKI搜索

    Figures(4)  / Tables(3)

    Article Metrics

    Article views (3) PDF downloads(0) Cited by()
    Proportional views
    Related

    /

    DownLoad:  Full-Size Img  PowerPoint
    Return
    Return